diff --git a/segment_seed.py b/segment_seed.py index e474cae..b5bfe57 100644 --- a/segment_seed.py +++ b/segment_seed.py @@ -4,7 +4,7 @@ from scipy.signal import savgol_filter from scipy.spatial import ConvexHull """ This file contains functions used to segment the contour of single cell with a seed point. -The principal algorithm is : +The principal algorithm is dynamic programming: 1. generate a series of rays of different direnctions from the seed of the cell detected, 2. compute several images which include pix_image, gradx, grady, grad_from_center... 3. get the values of each image on all points on the rays, which is named tab, pixtab, gxtab, gytab...