From 349be2e553d7aabf985b5dc682bd64fb4f9195eb Mon Sep 17 00:00:00 2001 From: Tanqiu Liu Date: Mon, 18 Sep 2017 16:49:45 -0500 Subject: [PATCH] Update segment_seed.py --- segment_seed.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/segment_seed.py b/segment_seed.py index e474cae..b5bfe57 100644 --- a/segment_seed.py +++ b/segment_seed.py @@ -4,7 +4,7 @@ from scipy.signal import savgol_filter from scipy.spatial import ConvexHull """ This file contains functions used to segment the contour of single cell with a seed point. -The principal algorithm is : +The principal algorithm is dynamic programming: 1. generate a series of rays of different direnctions from the seed of the cell detected, 2. compute several images which include pix_image, gradx, grady, grad_from_center... 3. get the values of each image on all points on the rays, which is named tab, pixtab, gxtab, gytab...